ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2zaeD1 - ECOD Domain | ECOD

ECOD/Domains/e2zaeD1

e2zaeD1

UID: 001039013

PDB

Range: D:12-109
PDB: 2ZAE chain D(all domains)
UniProt: O59248 (all domains)
Gene: rnp4

Molecule: Ribonuclease P protein component 4

3D Structure

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Related Domains

Browse other domains in Rpr2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRpr2(375.1.1.26)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Glycerin, Nitrate)

GlycerinGOL
DrugBank DB09462
Nitrate

Pfam Families

RNAse P Rpr2/Rpp21/SNM1 subunit domain

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 2ZAE RCSB PDB: 2ZAE PDBe: 2ZAE UniProt: O59248

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.