ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3szlB1 - ECOD Domain | ECOD

ECOD/Domains/e3szlB1

e3szlB1

UID: 001039513

PDB

Range: B:1-95
PDB: 3SZL chain B(all domains)
UniProt: P62623 (all domains)
Gene: ispH

Molecule: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase

3D Structure

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Related Domains

Browse other domains in LYTB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588)

HH-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588.1)

TT-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588.1.1)

FFamilyLYTB(7588.1.1.1)

Ligands

in contact, ≤ 4 Å

(2E)-4-hydroxy-3-methylbut-2-en-1-yl trihydrogen diphosphateH6P
Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

LytB protein

External Links

ECOD PDB View: 3SZL RCSB PDB: 3SZL PDBe: 3SZL UniProt: P62623

Downloads

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