ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ydgD1 - ECOD Domain | ECOD

ECOD/Domains/e1ydgD1

e1ydgD1

UID: 000104504

PDB

Range: D:3-203
PDB: 1YDG chain D(all domains)
UniProt: Q9RYU4 (all domains)
Gene: DR_A0214

Molecule: trp repressor binding protein WrbA

3D Structure

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Related Domains

Browse other domains in Flavodoxin_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupFlavoproteins/Phosphotyrosine protein phosphatases-like(2007.2)

TT-groupFlavoproteins(2007.2.1)

FFamilyFlavodoxin_1(2007.2.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00258Flavodoxin_1

Flavodoxin

ClanCL0042Flavoprotein

External Links

ECOD PDB View: 1YDG RCSB PDB: 1YDG PDBe: 1YDG UniProt: Q9RYU4

Downloads

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