ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1cqjD2 - ECOD Domain | ECOD

ECOD/Domains/e1cqjD2

e1cqjD2

UID: 000104537

PDB

Range: D:122-286
PDB: 1CQJ chain D(all domains)
UniProt: P0AGE9 (all domains)
Gene: sucD

Molecule: SUCCINYL-COA SYNTHETASE ALPHA CHAIN

3D Structure

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Related Domains

Browse other domains in Ligase_CoA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupSuccinyl-CoA synthetase domains(2007.3)

TT-groupSuccinyl-CoA synthetase domains(2007.3.1)

FFamilyLigase_CoA(2007.3.1.1)

Ligands

in contact, ≤ 4 Å

Coenzyme ACOA
drugDrugBank DB01992

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer.

Pfam Families

PF00549Ligase_CoA

CoA-ligase

ClanCL0506Succ_CoA_synth

External Links

ECOD PDB View: 1CQJ RCSB PDB: 1CQJ PDBe: 1CQJ UniProt: P0AGE9

Downloads

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Drug annotations from DrugDomain.