ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1deoA1 - ECOD Domain | ECOD

ECOD/Domains/e1deoA1

e1deoA1

UID: 000104794

PDB

Range: A:1-233
PDB: 1DEO chain A(all domains)
UniProt: Q00017 (all domains)
Gene: rha1

Molecule: RHAMNOGALACTURONAN ACETYLESTERASE

3D Structure

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Related Domains

Browse other domains in Lipase_GDSL →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupSGNH hydrolase(2007.5)

TT-groupSGNH hydrolase(2007.5.1)

FFamilyLipase_GDSL(2007.5.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00657Lipase_GDSL

GDSL-like Lipase/Acylhydrolase

ClanCL0264SGNH_hydrolase

External Links

ECOD PDB View: 1DEO RCSB PDB: 1DEO PDBe: 1DEO UniProt: Q00017

Downloads

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Drug annotations from DrugDomain.