ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1k98A3 - ECOD Domain | ECOD

ECOD/Domains/e1k98A3

e1k98A3

UID: 000105075

PDB

Range: A:741-896
PDB: 1K98 chain A(all domains)
UniProt: P13009 (all domains)
Gene: metH

Molecule: Methionine synthase

3D Structure

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Related Domains

Browse other domains in B12-binding →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupCheY-like(2007.1.3)

FFamilyB12-binding(2007.1.3.4)

Ligands

in contact, ≤ 4 Å

CobalaminB12

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02310B12-binding

B12 binding domain

External Links

ECOD PDB View: 1K98 RCSB PDB: 1K98 PDBe: 1K98 UniProt: P13009

Downloads

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