ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vkmA1 - ECOD Domain | ECOD

ECOD/Domains/e1vkmA1

e1vkmA1

UID: 000010560

RepresentativePDB

Range: A:-7-284
PDB: 1VKM chain A(all domains)
UniProt: Q9X1H5 (all domains)
Gene: psuG

Molecule: conserved hypothetical protein TM1464

3D Structure

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Related Domains

Browse other domains in Indigoidine_A →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupIndigoidine synthase A-like (Pfam 04227)(7549)

HH-groupIndigoidine synthase A-like (Pfam 04227)(7549.1)

TT-groupIndigoidine synthase A-like (Pfam 04227)(7549.1.1)

FFamilyIndigoidine_A(7549.1.1.1)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal
Unknown ligandUNL

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF04227Indigoidine_A

Indigoidine synthase A like protein

External Links

ECOD PDB View: 1VKM RCSB PDB: 1VKM PDBe: 1VKM UniProt: Q9X1H5

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.