ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1gytD1 - ECOD Domain | ECOD

ECOD/Domains/e1gytD1

e1gytD1

UID: 000105664

PDB

Range: D:180-503
PDB: 1GYT chain D(all domains)
UniProt: P68767 (all domains)
Gene: pepA

Molecule: CYTOSOL AMINOPEPTIDASE

3D Structure

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Related Domains

Browse other domains in Peptidase_M17 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M17(2011.1.1.3)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal
Chloride ionCL
within 5 Å only

+ 1 additive (Carbonate ion)

Carbonate ion

Pfam Families

PF00883Peptidase_M17

Cytosol aminopeptidase family, catalytic domain

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 1GYT RCSB PDB: 1GYT PDBe: 1GYT UniProt: P68767

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14531within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.