ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vixA2 - ECOD Domain | ECOD

ECOD/Domains/e1vixA2

e1vixA2

UID: 000105710

PDB

Range: A:1-207,A:321-409
PDB: 1VIX chain A(all domains)
UniProt: P29745 (all domains)
Gene: pepT

Molecule: Peptidase T

3D Structure

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Related Domains

Browse other domains in Peptidase_M20 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M20(2011.1.1.6)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01546Peptidase_M20

Peptidase family M20/M25/M40

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 1VIX RCSB PDB: 1VIX PDBe: 1VIX UniProt: P29745

Downloads

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