ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3c8yA5 - ECOD Domain | ECOD

ECOD/Domains/e3c8yA5

e3c8yA5

UID: 000010585

RepresentativePDB

Range: A:210-512
PDB: 3C8Y chain A(all domains)
UniProt: P29166 (all domains)

Molecule: Iron hydrogenase 1

3D Structure

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Related Domains

Browse other domains in Fe_hyd_lg_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFe-only hydrogenase(7556)

HH-groupFe-only hydrogenase(7556.1)

TT-groupFe-only hydrogenase(7556.1.1)

FFamilyFe_hyd_lg_C(7556.1.1.1)

Ligands

in contact, ≤ 4 Å

2 IRON/2 SULFUR/3 CARBONYL/2 CYANIDE/WATER/METHYLETHER CLUSTERHCN
Iron/sulfur clusterSF4

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF02906Fe_hyd_lg_C

Iron only hydrogenase large subunit, C-terminal domain

External Links

ECOD PDB View: 3C8Y RCSB PDB: 3C8Y PDBe: 3C8Y UniProt: P29166

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.