ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ccvA1 - ECOD Domain | ECOD

ECOD/Domains/e2ccvA1

e2ccvA1

UID: 000001060

RepresentativePDB

Range: A:1-99
PDB: 2CCV chain A(all domains)
UniProt: Q2F1K8 (all domains)
Gene: hpa

Molecule: HELIX POMATIA AGGLUTININ

3D Structure

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Related Domains

Browse other domains in H_lectin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupAgglutinin HPA-like(4182)

HH-groupAgglutinin HPA-like(4182.1)

TT-groupAgglutinin HPA-like(4182.1.1)

FFamilyH_lectin(4182.1.1.2)

Ligands

in contact, ≤ 4 Å

alpha-N-Acetyl-D-galactosamineA2G
drugDrugBank DB03567
N-AcetylglucosamineNAG
drugDrugBank DB00141

Pfam Families

PF09458H_lectin

H-type lectin domain

ClanCL0840H_lectin

External Links

ECOD PDB View: 2CCV RCSB PDB: 2CCV PDBe: 2CCV UniProt: Q2F1K8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Zinc ionZN

metal

+ 2 additives (Acetate, Glycerin)

AcetateACT
DrugBank DB14511
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.