ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2jfgA3 - ECOD Domain | ECOD

ECOD/Domains/e2jfgA3

e2jfgA3

UID: 000010630

RepresentativePDB

Range: A:298-437
PDB: 2JFG chain A(all domains)
UniProt: P14900 (all domains)
Gene: murD

Molecule: UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE

3D Structure

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Related Domains

Browse other domains in Mur_ligase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMurD-like peptide ligases, peptide-binding domain(7570)

HH-groupMurD-like peptide ligases, peptide-binding domain(7570.1)

TT-groupMurD-like peptide ligases, peptide-binding domain(7570.1.1)

FFamilyMur_ligase_C(7570.1.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Uridine-5'-Diphosphate-N-Acetylmuramoyl-L-AlanineUMA
drugDrugBank DB01673

Pfam Families

PF02875Mur_ligase_C

Mur ligase, glutamate ligase domain

ClanCL0794Mur_ligase_C_sf

External Links

ECOD PDB View: 2JFG RCSB PDB: 2JFG PDBe: 2JFG UniProt: P14900

Downloads

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+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.