ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4avtD1 - ECOD Domain | ECOD

ECOD/Domains/e4avtD1

e4avtD1

UID: 001063273

PDB

Range: D:1-204
PDB: 4AVT chain D(all domains)
UniProt: P02743 (all domains)
Gene: APCS

Molecule: SERUM AMYLOID P-COMPONENT

3D Structure

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Related Domains

Browse other domains in Pentaxin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyPentaxin(10.1.1.5)

Ligands

in contact, ≤ 4 Å

MiridesapGHE
drugDrugBank DB13087
N-AcetylglucosamineNAG
drugDrugBank DB00141

Pfam Families

PF00354Pentaxin

Pentaxin family

ClanCL0004Concanavalin

External Links

ECOD PDB View: 4AVT RCSB PDB: 4AVT PDBe: 4AVT UniProt: P02743

Downloads

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Calcium ionCA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.