ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4avtH1 - ECOD Domain | ECOD

ECOD/Domains/e4avtH1

e4avtH1

UID: 001063277

PDB

Range: H:1-204
PDB: 4AVT chain H(all domains)
UniProt: P02743 (all domains)
Gene: APCS

Molecule: SERUM AMYLOID P-COMPONENT

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pentaxin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyPentaxin(10.1.1.5)

Ligands

in contact, ≤ 4 Å

MiridesapGHE
drugDrugBank DB13087
N-AcetylglucosamineNAG
drugDrugBank DB00141

Pfam Families

PF00354Pentaxin

Pentaxin family

ClanCL0004Concanavalin

External Links

ECOD PDB View: 4AVT RCSB PDB: 4AVT PDBe: 4AVT UniProt: P02743

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Calcium ionCA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.