ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zjjC1 - ECOD Domain | ECOD

ECOD/Domains/e3zjjC1

e3zjjC1

UID: 001063921

PDB

Range: C:6-195
PDB: 3ZJJ chain C(all domains)
UniProt: Q8TLY9 (all domains)
Gene: MA_2883

Molecule: PROTOGLOBIN

3D Structure

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Related Domains

Browse other domains in Protoglobin →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyProtoglobin(106.1.1.7)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Cyanide ionCYN

+ 3 additives (HEPES, Glycerin, Isopropyl alcohol)

HEPES

Pfam Families

PF11563Protoglobin

Protoglobin

ClanCL0090Globin

External Links

ECOD PDB View: 3ZJJ RCSB PDB: 3ZJJ PDBe: 3ZJJ UniProt: Q8TLY9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB16872

GlycerinGOL

DrugBank DB09462

Isopropyl alcoholIPA

DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.