ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3zjmC1 - ECOD Domain | ECOD

ECOD/Domains/e3zjmC1

e3zjmC1

UID: 001063924

PDB

Range: C:5-195
PDB: 3ZJM chain C(all domains)
UniProt: Q8TLY9 (all domains)
Gene: MA_2883

Molecule: PROTOGLOBIN

3D Structure

Loading viewer...

Related Domains

Browse other domains in Protoglobin →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyProtoglobin(106.1.1.7)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Cyanide ionCYN

+ 2 additives (HEPES, Glycerin)

HEPES

Pfam Families

PF11563Protoglobin

Protoglobin

ClanCL0090Globin

External Links

ECOD PDB View: 3ZJM RCSB PDB: 3ZJM PDBe: 3ZJM UniProt: Q8TLY9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB16872

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.