ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4f2lA1 - ECOD Domain | ECOD

ECOD/Domains/e4f2lA1

e4f2lA1

UID: 001064049

RepresentativePDB

Range: A:284-336
PDB: 4F2L chain A(all domains)
UniProt: P54645 (all domains)
Gene: Prkaa1

Molecule: 5'-AMP-activated protein kinase catalytic subunit alpha-1

3D Structure

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Related Domains

Browse other domains in AMPK_alpha_AID →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyAMPK_alpha_AID(103.1.1.21)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21147AMPK_alpha_AID

AMP-activated protein kinase, alpha subunit, autoinhibitory domain

ClanCL0214UBA

External Links

ECOD PDB View: 4F2L RCSB PDB: 4F2L PDBe: 4F2L UniProt: P54645

Downloads

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