ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ghtB1 - ECOD Domain | ECOD

ECOD/Domains/e4ghtB1

e4ghtB1

UID: 001064091

PDB

Range: B:1-180
PDB: 4GHT chain B(all domains)
UniProt: A9XG43 (all domains)

Molecule: 3C proteinase

3D Structure

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Related Domains

Browse other domains in Peptidase_C3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyPeptidase_C3(1.1.17.2)

Ligands

in contact, ≤ 4 Å

Ethyl (4R)-4-{[(2R,5S)-2-(4-fluorobenzyl)-6-methyl-5-{[(5-methyl-1,2-oxazol-3-yl)carbonyl]amino}-4-oxoheptanoyl]amino}-5-[(3S)-2-oxo-3-pyrrolidinyl]pentanoateAG7
drugDrugBank DB02313

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00548Peptidase_C3

3C cysteine protease (picornain 3C)

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 4GHT RCSB PDB: 4GHT PDBe: 4GHT UniProt: A9XG43

Downloads

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