ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1sm4B2 - ECOD Domain | ECOD

ECOD/Domains/e1sm4B2

e1sm4B2

UID: 000106437

PDB

Range: B:1208-1362
PDB: 1SM4 chain B(all domains)
UniProt: Q9M4D2 (all domains)
Gene: fnr

Molecule: chloroplast ferredoxin-NADP+ oxidoreductase

3D Structure

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Related Domains

Browse other domains in NAD_binding_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFerredoxin reductase-like, C-terminal NADP-linked domain(7514)

HH-groupFerredoxin reductase-like, C-terminal NADP-linked domain(7514.1)

TT-groupFerredoxin reductase-like, C-terminal NADP-linked domain(7514.1.1)

FFamilyNAD_binding_1(7514.1.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer.

Pfam Families

PF00175NAD_binding_1

Oxidoreductase NAD-binding domain

ClanCL0091NAD_Ferredoxin

External Links

ECOD PDB View: 1SM4 RCSB PDB: 1SM4 PDBe: 1SM4 UniProt: Q9M4D2

Downloads

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Drug annotations from DrugDomain.