ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zm6A3 - ECOD Domain | ECOD

ECOD/Domains/e3zm6A3

e3zm6A3

UID: 001064592

PDB

Range: A:1-98
PDB: 3ZM6 chain A(all domains)
UniProt: Q8DNV6 (all domains)
Gene: murF

Molecule: UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE

3D Structure

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Related Domains

Browse other domains in Mur_ligase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMurF and HprK N-domain-like(2493)

HH-groupMurF and HprK N-domain-like(2493.1)

TT-groupMurF and HprK N-domain-like(2493.1.1)

FFamilyMur_ligase(2493.1.1.1)

Ligands

in contact, ≤ 4 Å

N-(6-(4-(2h-tetrazol-5-yl)benzyl)-3-cyano-4,5,6,7-tetrahydrothieno[2,3-c]pyridin-2-yl)-2,4-dichloro-5-(morpholinosulfonyl)benzamide2GN

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01225Mur_ligase

Mur ligase family, catalytic domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3ZM6 RCSB PDB: 3ZM6 PDBe: 3ZM6 UniProt: Q8DNV6

Downloads

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