ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lbgB1 - ECOD Domain | ECOD

ECOD/Domains/e4lbgB1

e4lbgB1

UID: 001065672

PDB

Range: B:-1-328
PDB: 4LBG chain B(all domains)
UniProt: Q2KDX6 (all domains)
Gene: RHE_CH00135

Molecule: Probable sugar kinase protein

3D Structure

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Related Domains

Browse other domains in PfkB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRibokinase-like(2003.6)

TT-groupRibokinase-like(2003.6.1)

FFamilyPfkB(2003.6.1.1)

Ligands

in contact, ≤ 4 Å

AdenosineADN
drugDrugBank DB00640
Potassium ionK
metal

+ 1 additive (Dimethyl sulfoxide)

Pfam Families

pfkB family carbohydrate kinase

ClanCL0118Ribokinase

External Links

ECOD PDB View: 4LBG RCSB PDB: 4LBG PDBe: 4LBG UniProt: Q2KDX6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Dimethyl sulfoxide

DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.