ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2yphA1 - ECOD Domain | ECOD

ECOD/Domains/e2yphA1

e2yphA1

UID: 001065695

PDB

Range: A:163-378
PDB: 2YPH chain A(all domains)
UniProt: P16330 (all domains)
Gene: Cnp

Molecule: 2', 3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE

3D Structure

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Related Domains

Browse other domains in CNPase →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLigT-like(264)

HH-groupLigT-related(264.1)

TT-groupLigT-related(264.1.1)

FFamilyCNPase(264.1.1.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
[(3aR,4R,6R,6aR)-4-(6-aminopurin-9-yl)-2-oxidanylidene-2-sulfanyl-3a,4,6,6a-tetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-6-yl]methanolQQY

+ 1 additive (Acetate)

AcetateACT

Pfam Families

2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase)

ClanCL02472H

External Links

ECOD PDB View: 2YPH RCSB PDB: 2YPH PDBe: 2YPH UniProt: P16330

Downloads

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DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.