ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lfeB1 - ECOD Domain | ECOD

ECOD/Domains/e4lfeB1

e4lfeB1

UID: 001066205

PDB

Range: B:2-289
PDB: 4LFE chain B(all domains)
UniProt: B9DUT7 (all domains)
Gene: fps

Molecule: Geranylgeranyl diphosphate synthase

3D Structure

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Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

ISOPENTENYL PYROPHOSPHATEIPE
drugDrugBank DB04714
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 4LFE RCSB PDB: 4LFE PDBe: 4LFE UniProt: B9DUT7

Downloads

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