ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ivnA1 - ECOD Domain | ECOD

ECOD/Domains/e4ivnA1

e4ivnA1

UID: 001066899

PDB

Range: A:82-278
PDB: 4IVN chain A(all domains)
UniProt: Q7MD38 (all domains)
Gene: VVA1198

Molecule: Transcriptional regulator

3D Structure

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Related Domains

Browse other domains in SIS →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupRibosomal protein S2/SIS domain(2007.6)

TT-groupRibosomal protein S2/SIS domain(2007.6.1)

FFamilySIS(2007.6.1.4)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranoseBMX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SIS domain

ClanCL0067SIS

External Links

ECOD PDB View: 4IVN RCSB PDB: 4IVN PDBe: 4IVN UniProt: Q7MD38

Downloads

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