ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4k6lC1 - ECOD Domain | ECOD

ECOD/Domains/e4k6lC1

e4k6lC1

UID: 001066954

PDB

Range: C:24-137
PDB: 4K6L chain C(all domains)
UniProt: Q8Z6A3 (all domains)
Gene: pltB

Molecule: Putative pertussis-like toxin subunit

3D Structure

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Related Domains

Browse other domains in Pertussis_S2S3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupBacterial enterotoxins(2.2)

TT-groupBacterial enterotoxins(2.2.1)

FFamilyPertussis_S2S3(2.2.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02918Pertussis_S2S3

Pertussis toxin, subunit 2 and 3, C-terminal domain

ClanCL0658OB_enterotoxin

External Links

ECOD PDB View: 4K6L RCSB PDB: 4K6L PDBe: 4K6L UniProt: Q8Z6A3

Downloads

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