ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3kdwA1 - ECOD Domain | ECOD

ECOD/Domains/e3kdwA1

e3kdwA1

UID: 001068646

RepresentativePDB

Range: A:21-220
PDB: 3KDW chain A(all domains)
UniProt: A6L4E1 (all domains)
Gene: BVU_2916

Molecule: Putative sugar binding protein

3D Structure

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Related Domains

Browse other domains in DUF3826 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLTXXQ motif family protein(3711)

HH-groupLTXXQ motif family protein(3711.1)

TT-groupLTXXQ motif family protein(3711.1.1)

FFamilyDUF3826(3711.1.1.2)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(4R)-2-METHYLPENTANE-2,4-DIOLMRD

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, Phosphate ion)

(4r)-2-Methylpentane-2,4-DiolMPD

Pfam Families

PF12875DUF3826

Protein of unknown function (DUF3826)

ClanCL0515LTXXQ-like

External Links

ECOD PDB View: 3KDW RCSB PDB: 3KDW PDBe: 3KDW UniProt: A6L4E1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03564

Phosphate ionPO4

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.