ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3c1qA1 - ECOD Domain | ECOD

ECOD/Domains/e3c1qA1

e3c1qA1

UID: 001068825

PDB

Range: A:57-170
PDB: 3C1Q chain A(all domains)
UniProt: P45780 (all domains)
Gene: epsF

Molecule: General secretion pathway protein F

3D Structure

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Related Domains

Browse other domains in T2SSF →

Classification

AArchitecturealpha bundles(a.7)

XX-groupV-type ATP synthase subunit C(5060)

HH-groupToxin coregulated pilus biosynthesis protein E cytoplasmic domain(5060.2)

TT-groupToxin coregulated pilus biosynthesis protein E cytoplasmic domain(5060.2.1)

FFamilyT2SSF(5060.2.1.1)

Ligands

in contact, ≤ 4 Å

2-(2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol, Polyethyleneglycol Peg400PE5
drugDrugBank DB03556
Calcium ionCA
metal

Pfam Families

Type II secretion system (T2SS), protein F

External Links

ECOD PDB View: 3C1Q RCSB PDB: 3C1Q PDBe: 3C1Q UniProt: P45780

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Chloride ionCL

Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.