ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qgqA1 - ECOD Domain | ECOD

ECOD/Domains/e1qgqA1

e1qgqA1

UID: 000106883

PDB

Range: A:2-256
PDB: 1QGQ chain A(all domains)
UniProt: P39621 (all domains)
Gene: spsA

Molecule: PROTEIN (SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN SPSA)

3D Structure

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Related Domains

Browse other domains in Glycos_transf_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyGlycos_transf_2(7516.1.1.2)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435
MANGANESE (II) IONMN
metal
Magnesium ion

Pfam Families

PF00535Glycos_transf_2

Glycosyl transferase family 2

ClanCL0110GT-A

External Links

ECOD PDB View: 1QGQ RCSB PDB: 1QGQ PDBe: 1QGQ UniProt: P39621

Downloads

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metalwithin 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.