ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4igbD1 - ECOD Domain | ECOD

ECOD/Domains/e4igbD1

e4igbD1

UID: 001070073

PDB

Range: D:36-311
PDB: 4IGB chain D(all domains)
UniProt: A8AW49 (all domains)
Gene: SGO_0707

Molecule: LPXTG cell wall surface protein

3D Structure

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Related Domains

Browse other domains in Sgo0707_N1 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupV-region of surface antigen I/II (SA I/II, PAC)(12.4)

TT-groupV-region of surface antigen I/II (SA I/II, PAC)(12.4.1)

FFamilySgo0707_N1(12.4.1.3)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Pfam Families

PF18873Sgo0707_N1

Sgo0707 N-terminal domain

External Links

ECOD PDB View: 4IGB RCSB PDB: 4IGB PDBe: 4IGB UniProt: A8AW49

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.