ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vl8B2 - ECOD Domain | ECOD

ECOD/Domains/e2vl8B2

e2vl8B2

UID: 000107262

PDB

Range: B:91-540
PDB: 2VL8 chain B(all domains)
UniProt: Q46342 (all domains)
Gene: tcsL

Molecule: CYTOTOXIN L

3D Structure

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Related Domains

Browse other domains in TcdA_TcdB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyTcdA_TcdB(7516.1.1.25)

Ligands

in contact, ≤ 4 Å

CastanospermineCTS
drugDrugBank DB01816
Uridine-5'-DiphosphateUDP
drugDrugBank DB03435
Calcium ion

Pfam Families

PF12919TcdA_TcdB

TcdA/TcdB catalytic glycosyltransferase domain

ClanCL0110GT-A

External Links

ECOD PDB View: 2VL8 RCSB PDB: 2VL8 PDBe: 2VL8 UniProt: Q46342

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.