ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4b1uB1 - ECOD Domain | ECOD

ECOD/Domains/e4b1uB1

e4b1uB1

UID: 001086242

PDB

Range: B:5-139
PDB: 4B1U chain B(all domains)
UniProt: P68134 (all domains)
Gene: Acta1

Molecule: ACTIN, ALPHA SKELETAL MUSCLE

3D Structure

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Related Domains

Browse other domains in Actin →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyActin(2484.1.1.2)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Latrunculin BLAB
drugDrugBank DB08080
Magnesium ion

Pfam Families

Actin

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 4B1U RCSB PDB: 4B1U PDBe: 4B1U UniProt: P68134

Downloads

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metalwithin 5 Å only

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.