ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4h8rA1 - ECOD Domain | ECOD

ECOD/Domains/e4h8rA1

e4h8rA1

UID: 001087112

PDB

Range: A:59-173
PDB: 4H8R chain A(all domains)
UniProt: Q09HD0 (all domains)
Gene: blaGES-5

Molecule: Extended-spectrum beta-lactamase GES-5

3D Structure

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Related Domains

Browse other domains in Beta-lactamase2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyBeta-lactamase2(4019.1.1.6)

Ligands

in contact, ≤ 4 Å

(5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carboxylic acidIM2
Iodide ionIOD
Sodium ionNA
metal

Pfam Families

PF13354Beta-lactamase2

Beta-lactamase enzyme family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 4H8R RCSB PDB: 4H8R PDBe: 4H8R UniProt: Q09HD0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.