ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4h8rB2 - ECOD Domain | ECOD

ECOD/Domains/e4h8rB2

e4h8rB2

UID: 001087115

PDB

Range: B:19-58,B:174-284
PDB: 4H8R chain B(all domains)
UniProt: Q09HD0 (all domains)
Gene: blaGES-5

Molecule: Extended-spectrum beta-lactamase GES-5

3D Structure

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Related Domains

Browse other domains in Beta-lactamase2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyBeta-lactamase2(223.3.1.8)

Ligands

in contact, ≤ 4 Å

(5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carboxylic acidIM2
Iodide ionIOD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13354Beta-lactamase2

Beta-lactamase enzyme family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 4H8R RCSB PDB: 4H8R PDBe: 4H8R UniProt: Q09HD0

Downloads

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