ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4i2dA3 - ECOD Domain | ECOD

ECOD/Domains/e4i2dA3

e4i2dA3

UID: 001087146

PDB

Range: A:303-510
PDB: 4I2D chain A(all domains)
UniProt: P09838 (all domains)
Gene: Dntt

Molecule: DNA nucleotidylexotransferase

3D Structure

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Related Domains

Browse other domains in NTP_transf_2,DNA_pol_B_thumb →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyNTP_transf_2,DNA_pol_B_thumb(316.1.1.4)

Ligands

in contact, ≤ 4 Å

alpha,beta-Methyleneadenosine 5'-triphosphateAPC
drugDrugBank DB02596
Magnesium ionMG
metal
Zinc ion

Pfam Families

PF01909NTP_transf_2

Nucleotidyltransferase domain

ClanCL0260NTP_transf

PF14791DNA_pol_B_thumb

DNA polymerase beta thumb

External Links

ECOD PDB View: 4I2D RCSB PDB: 4I2D PDBe: 4I2D UniProt: P09838

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.