ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kdoA1 - ECOD Domain | ECOD

ECOD/Domains/e4kdoA1

e4kdoA1

UID: 001087292

PDB

Range: A:4-325
PDB: 4KDO chain A(all domains)
UniProt: Q6DQ33 (all domains)
Gene: HA

Molecule: Hemagglutinin

3D Structure

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Related Domains

Browse other domains in Hemagglutinin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupViral protein domain(10.5)

TT-groupViral protein domain(10.5.1)

FFamilyHemagglutinin(10.5.1.1)

Ligands

in contact, ≤ 4 Å

N-acetyl-alpha-neuraminic acidSIA
drugDrugBank DB03721
N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Pfam Families

PF00509Hemagglutinin

Haemagglutinin

External Links

ECOD PDB View: 4KDO RCSB PDB: 4KDO PDBe: 4KDO UniProt: Q6DQ33

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.