ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bf7A1 - ECOD Domain | ECOD

ECOD/Domains/e4bf7A1

e4bf7A1

UID: 001087977

PDB

Range: A:1-335
PDB: 4BF7 chain A(all domains)
UniProt: Q5B153 (all domains)
Gene: galA

Molecule: ARABINOGALACTAN ENDO-1,4-BETA-GALACTOSIDASE A

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_53 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_53(2002.1.1.151)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Zinc ionZN
metal

+ 3 additives (Acetate, Glycerin, Imidazole)

Pfam Families

PF07745Glyco_hydro_53

Glycosyl hydrolase family 53

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4BF7 RCSB PDB: 4BF7 PDBe: 4BF7 UniProt: Q5B153

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT

DrugBank DB14511

GlycerinGOL

DrugBank DB09462

ImidazoleIMD

DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.