ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bqsB1 - ECOD Domain | ECOD

ECOD/Domains/e4bqsB1

e4bqsB1

UID: 001087982

PDB

Range: B:2-170
PDB: 4BQS chain B(all domains)
UniProt: P9WPY2 (all domains)
Gene: aroK

Molecule: SHIKIMATE KINASE

3D Structure

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Related Domains

Browse other domains in SKI →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySKI(2004.1.1.60)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
(1R,6R,10S)-6,10-dihydroxy-2-oxabicyclo[4.3.1]deca-4(Z),7-diene-8-carboxylic acidK2Q

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Shikimate kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4BQS RCSB PDB: 4BQS PDBe: 4BQS UniProt: P9WPY2

Downloads

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