ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kdzA1 - ECOD Domain | ECOD

ECOD/Domains/e4kdzA1

e4kdzA1

UID: 001088308

PDB

Range: A:1-156
PDB: 4KDZ chain A(all domains)
UniProt: Q1R4Y9 (all domains)
Gene: yibK

Molecule: tRNA (cytidine(34)-2'-O)-methyltransferase

3D Structure

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Related Domains

Browse other domains in SpoU_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilySpoU_methylase(2488.1.1.1)

Pfam Families

PF00588SpoU_methylase

SpoU rRNA Methylase family

ClanCL0098SPOUT

External Links

ECOD PDB View: 4KDZ RCSB PDB: 4KDZ PDBe: 4KDZ UniProt: Q1R4Y9

Downloads

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