ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lk3D1 - ECOD Domain | ECOD

ECOD/Domains/e4lk3D1

e4lk3D1

UID: 001088388

PDB

Range: D:88-206,D:233-399
PDB: 4LK3 chain D(all domains)
UniProt: Q8NBZ7 (all domains)
Gene: UXS1

Molecule: UDP-glucuronic acid decarboxylase 1

3D Structure

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Related Domains

Browse other domains in Epimerase, GDP_Man_Dehyd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyEpimerase, GDP_Man_Dehyd(2003.1.1.153)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
Uridine-5'-DiphosphateUDP
drugDrugBank DB03435
UDP-alpha-D-glucuronic acid

Pfam Families

PF01370Epimerase

NAD dependent epimerase/dehydratase family

ClanCL0063NADP_Rossmann

PF16363GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4LK3 RCSB PDB: 4LK3 PDBe: 4LK3 UniProt: Q8NBZ7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB03041

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.