ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bq4A1 - ECOD Domain | ECOD

ECOD/Domains/e4bq4A1

e4bq4A1

UID: 001088529

PDB

Range: A:244-793
PDB: 4BQ4 chain A(all domains)
UniProt: Q21HC5 (all domains)
Gene: aga50B

Molecule: B-AGARASE

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_42 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_42(2002.1.1.94)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02449Glyco_hydro_42

Beta-galactosidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4BQ4 RCSB PDB: 4BQ4 PDBe: 4BQ4 UniProt: Q21HC5

Downloads

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