ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4i7cC1 - ECOD Domain | ECOD

ECOD/Domains/e4i7cC1

e4i7cC1

UID: 001088625

PDB

Range: C:154-282
PDB: 4I7C chain C(all domains)
UniProt: Q8IUQ4 (all domains)
Gene: SIAH1

Molecule: E3 ubiquitin-protein ligase SIAH1

3D Structure

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Related Domains

Browse other domains in Sina_TRAF →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupTRAF domain-like(11.10)

TT-groupTRAF domain-like(11.10.1)

FFamilySina_TRAF(11.10.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03145Sina_TRAF

Sina, TRAF-like domain

ClanCL0389TRAF

External Links

ECOD PDB View: 4I7C RCSB PDB: 4I7C PDBe: 4I7C UniProt: Q8IUQ4

Downloads

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