ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lbaB1 - ECOD Domain | ECOD

ECOD/Domains/e4lbaB1

e4lbaB1

UID: 001088881

RepresentativePDB

Range: B:38-146
PDB: 4LBA chain B(all domains)
UniProt: B7AKX5 (all domains)

Molecule: conjugative transposon lipoprotein

3D Structure

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Related Domains

Browse other domains in TraQ_transposon →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyTraQ_transposon(11.1.1.168)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Pentaethylene glycol, 1,2-ETHANEDIOL)

Pentaethylene glycol1PE
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12988TraQ_transposon

TraQ conjugal transfer protein

ClanCL0159E-set

External Links

ECOD PDB View: 4LBA RCSB PDB: 4LBA PDBe: 4LBA UniProt: B7AKX5

Downloads

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