ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jdbE6 - ECOD Domain | ECOD

ECOD/Domains/e1jdbE6

e1jdbE6

UID: 000109498

PDB

Range: E:936-1072
PDB: 1JDB chain E(all domains)
UniProt: P00968 (all domains)
Gene: carB

Molecule: CARBAMOYL PHOSPHATE SYNTHETASE

3D Structure

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Related Domains

Browse other domains in MGS →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMethylglyoxal synthase-like(7543)

HH-groupMethylglyoxal synthase-like(7543.1)

TT-groupMethylglyoxal synthase-like(7543.1.1)

FFamilyMGS(7543.1.1.2)

Ligands

in contact, ≤ 4 Å

OrnithineORN
drugDrugBank DB00129
GlutamineGLN

+ 1 additive (Phosphate ion)

Phosphate ionPO4

Pfam Families

MGS-like domain

External Links

ECOD PDB View: 1JDB RCSB PDB: 1JDB PDBe: 1JDB UniProt: P00968

Downloads

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DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.