ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gn5D1 - ECOD Domain | ECOD

ECOD/Domains/e4gn5D1

e4gn5D1

UID: 001096507

PDB

Range: D:1-129
PDB: 4GN5 chain D(all domains)
UniProt: P00698 (all domains)
Gene: LYZ

Molecule: Lysozyme C

3D Structure

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Related Domains

Browse other domains in Lys →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilyLys(235.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate, HEPES, Glycerin)

AcetateACT
DrugBank DB14511
HEPESEPE
DrugBank DB16872
Glycerin

Pfam Families

C-type lysozyme/alpha-lactalbumin family

ClanCL0037Lysozyme

External Links

ECOD PDB View: 4GN5 RCSB PDB: 4GN5 PDBe: 4GN5 UniProt: P00698

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.