ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kfdF2 - ECOD Domain | ECOD

ECOD/Domains/e4kfdF2

e4kfdF2

UID: 001096652

PDB

Range: F:17-100
PDB: 4KFD chain F(all domains)
UniProt: P12807 (all domains)
Gene: AMO

Molecule: Peroxisomal primary amine oxidase

3D Structure

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Related Domains

Browse other domains in Cu_amine_oxidN2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCystatin-like(243)

HH-groupAmine oxidase N-terminal region(243.5)

TT-groupAmine oxidase N-terminal region(243.5.1)

FFamilyCu_amine_oxidN2(243.5.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02727Cu_amine_oxidN2

Copper amine oxidase, N2 domain

ClanCL0047CuAO_N2_N3

External Links

ECOD PDB View: 4KFD RCSB PDB: 4KFD PDBe: 4KFD UniProt: P12807

Downloads

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