ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kfeB3 - ECOD Domain | ECOD

ECOD/Domains/e4kfeB3

e4kfeB3

UID: 001096656

PDB

Range: B:101-221
PDB: 4KFE chain B(all domains)
UniProt: P12807 (all domains)
Gene: AMO

Molecule: Peroxisomal primary amine oxidase

3D Structure

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Related Domains

Browse other domains in Cu_amine_oxidN3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCystatin-like(243)

HH-groupAmine oxidase N-terminal region(243.5)

TT-groupAmine oxidase N-terminal region(243.5.1)

FFamilyCu_amine_oxidN3(243.5.1.2)

Ligands

in contact, ≤ 4 Å

FormaldehydeFOR
drugDrugBank DB03843

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF02728Cu_amine_oxidN3

Copper amine oxidase, N3 domain

ClanCL0047CuAO_N2_N3

External Links

ECOD PDB View: 4KFE RCSB PDB: 4KFE PDBe: 4KFE UniProt: P12807

Downloads

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Phosphate ion

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.