ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1vkmD1 - ECOD Domain | ECOD

ECOD/Domains/e1vkmD1

e1vkmD1

UID: 000109707

PDB

Range: D:1-284
PDB: 1VKM chain D(all domains)
UniProt: Q9X1H5 (all domains)
Gene: psuG

Molecule: conserved hypothetical protein TM1464

3D Structure

Loading viewer...

Related Domains

Browse other domains in Indigoidine_A →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupIndigoidine synthase A-like (Pfam 04227)(7549)

HH-groupIndigoidine synthase A-like (Pfam 04227)(7549.1)

TT-groupIndigoidine synthase A-like (Pfam 04227)(7549.1.1)

FFamilyIndigoidine_A(7549.1.1.1)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal
Unknown ligandUNL

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF04227Indigoidine_A

Indigoidine synthase A like protein

External Links

ECOD PDB View: 1VKM RCSB PDB: 1VKM PDBe: 1VKM UniProt: Q9X1H5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.