ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4avgD1 - ECOD Domain | ECOD

ECOD/Domains/e4avgD1

e4avgD1

UID: 001097915

PDB

Range: D:1-197
PDB: 4AVG chain D(all domains)
UniProt: C3W5S0 (all domains)
Gene: PA

Molecule: POLYMERASE PA

3D Structure

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Related Domains

Browse other domains in Flu_PA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyFlu_PA(2008.1.1.1)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal
(Z)-4-[4-[(4-chlorophenyl)methyl]-1-(cyclohexylmethyl)piperidin-4-yl]-2-oxidanyl-4-oxidanylidene-but-2-enoic acidSL6

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Influenza RNA-dependent RNA polymerase subunit PA

ClanCL0236PDDEXK

External Links

ECOD PDB View: 4AVG RCSB PDB: 4AVG PDBe: 4AVG UniProt: C3W5S0

Downloads

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