ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bq2D1 - ECOD Domain | ECOD

ECOD/Domains/e4bq2D1

e4bq2D1

UID: 001098413

PDB

Range: D:244-791
PDB: 4BQ2 chain D(all domains)
UniProt: Q21HC5 (all domains)
Gene: aga50B

Molecule: B-AGARASE

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_42 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_42(2002.1.1.94)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02449Glyco_hydro_42

Beta-galactosidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4BQ2 RCSB PDB: 4BQ2 PDBe: 4BQ2 UniProt: Q21HC5

Downloads

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