ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ro7B1 - ECOD Domain | ECOD

ECOD/Domains/e1ro7B1

e1ro7B1

UID: 000109861

PDB

Range: B:1-258
PDB: 1RO7 chain B(all domains)
UniProt: Q9LAK3 (all domains)
Gene: cst-II

Molecule: alpha-2,3/8-sialyltransferase

3D Structure

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Related Domains

Browse other domains in CST-I →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupAlpha-2,3/8-sialyltransferase CstII-related(7555)

HH-groupAlpha-2,3/8-sialyltransferase CstII-related(7555.1)

TT-groupAlpha-2,3/8-sialyltransferase CstII-related(7555.1.1)

FFamilyCST-I(7555.1.1.3)

Ligands

in contact, ≤ 4 Å

CYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACIDCSF

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Alpha-2,3-sialyltransferase (CST-I)

ClanCL0948GT29-like

External Links

ECOD PDB View: 1RO7 RCSB PDB: 1RO7 PDBe: 1RO7 UniProt: Q9LAK3

Downloads

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